meningotypeIn silico serotyping, finetyping, and Bexsero antigen sequence typing of Neisseria meningitidis.Versions

v0.8.5 (default)

Tags: bioinformatics, Neisseria meningitidis, serotyping, sequence typing, cpgParameters

INPUT_FASTA (file, multiple) required: Input FASTA file(s) containing Neisseria meningitidis sequences.

finetype (bool): Perform porA and fetA fine typing.

porB (bool): Perform porB sequence typing (NEIS2020).

bast (bool): Perform Bexsero antigen sequence typing (BAST).

mlst (bool): Perform Multi-Locus Sequence Typing (MLST).

Links

License: GPL-3.0

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