QUASTQUAST (QUality ASsessment Tool) evaluates genome and metagenome assemblies by computing a variety of quality metrics, generating reports and visualizations to help compare assembly performance with or without a reference genome.Versions

v5.3.0 (default)

Tags: genome assembly, quality assessment, bioinformaticsParameters

input_assemblies (file, multiple) required: One or more genome assembly FASTA files to evaluate.

reference (file): Optional reference genome FASTA for reference-based quality metrics.

Links

License: MIT License

Cite as: Gurevich, A., Saveliev, V., Vyahhi, N. & Tesler, G. QUAST: quality assessment tool for genome assemblies. _Bioinformatics_ 29, 1072–1075 (2013).

Open QUAST in the CPG Portal. Configuring and running a tool needs JavaScript.